Table 3

Characteristics of the detected QTLs explaining waterlogging related traits in the Franklin/TX9425 population.
Trait
 QTL
 Chr.
 One LOD support interval (cM)
 LOD score
 R2 (%)
Leaf chlorosis 1.1
 tfy1.1-1
 2H
 31–35
 9.21
 23.3
(two weeks stress, 2004)
 tfy1.1-2
 3H
 68–71
 7.59
 33.4

tfy1.1-3
 1H
 61–67
 2.75
 7.1






Leaf chlorosis 1.2
 tfy1.2-1
 3H
 67–71
 7.31
 36
(four weeks stress, 2004)










Leaf chlorosis 2.1
 tfy2.1-1
 3H
 68–73
 9.28
 34.1
(two weeks stress, 2005)
 tfy2.1-2
 7H
 72–98
 3.62
 16






Plant biomass reduction
 tfmas
 4H
 47–78
 2.75
 16.3






Plant survival
 tfsur-1
 2H
 49–65
 3.29
 19

tfsur-2
 2H
 15–18
 2.75
 13.2

Li et al. BMC Genomics 2008 9:401   doi:10.1186/1471-2164-9-401