BMC Genomics

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Open Access Highly Access Methodology article

Genome-wide analysis of antisense transcription with Affymetrix exon array

Xijin Ge1*, Wendy S Rubinstein2,5, Yong-chul Jung3 and Qingfa Wu4

Author Affiliations

1 Department of Mathematics and Statistics, South Dakota State University, Box 2220, Brookings, SD 57007, USA

2 Center for Medical Genetics, Evanston Northwestern Healthcare, 1000 Central Street, Suite 620, Evanston, IL 60201, USA

3 Center for Functional Genomics, ENH Research Institute, 1001 University Place, Evanston, IL 60201, USA

4 Dept. of Plant Pathology & Microbiology, College of Natural and Agricultural Sciences, University of California Riverside, Riverside, CA 92521, USA

5 Northwestern University Feinberg School of Medicine, Chicago, IL 60611, USA

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BMC Genomics 2008, 9:27 doi:10.1186/1471-2164-9-27

Published: 22 January 2008

Additional files

Additional file 1:

List of detected antisense transcripts in Jurkat cells. This file lists the probes that were found to be confidently expressed in Jurkat cells at the antisense orientation. Both annotation and expression data are given.

Format: XLS Size: 1.6MB Download file

This file can be viewed with: Microsoft Excel Viewer

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Additional file 2:

List of PCR primers used for experimental validation. This file contains the forward and reverse primers for 24 PCR reactions.

Format: XLS Size: 23KB Download file

This file can be viewed with: Microsoft Excel Viewer

Open Data