Table 1 |
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|
Transposable elements inserted nearby of 97 retrogenes and 13375 "canonical" genes |
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|
Gene region |
Gene seta |
Genes associated with TEsb |
Proportion (%) |
Fisher's exact test |
|
|
||||
|
5'UTR |
Retrogene |
1 |
1.03 |
P = 1.0000 |
|
"Canonical" genes |
97 |
0.73 |
||
|
3'UTR |
Retrogene |
2 |
2.06 |
P = 0.2699 |
|
"Canonical" genes |
139 |
1.04 |
||
|
2 kb upstream |
Retrogene |
7 |
7.22 |
P = 0.7198 |
|
"Canonical" genes |
1189 |
8.89 |
||
|
2 kb downstream |
Retrogene |
12 |
12.37 |
P = 0.1338 |
|
"Canonical" genes |
1085 |
8.11 |
||
|
|
||||
|
a "Canonical" genes refers to FlyBase genes annotated in the D. melanogaster release 3.2.1 [52]. b TEs: transposable elements |
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|
Bai et al. BMC Genomics 2008 9:241 doi:10.1186/1471-2164-9-241 |
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