A linkage map of the Atlantic salmon (Salmo salar) based on EST-derived SNP markers

Thomas Moen¹^,2 , Ben Hayes¹^,2 , Matthew Baranski¹^,2 , Paul R Berg¹^,3 , Sissel Kjøglum⁴ , Ben F Koop⁵ , Willie S Davidson⁶ , Stig W Omholt¹^,3 and Sigbjørn Lien¹^,3

¹CIGENE – Centre of Integrative Genetics, Ås, Norway

²AKVAFORSK – Institute of Aquaculture Research, Ås, Norway

³Institute of Animal and Aquacultural Sciences, Norwegian University of Life Science, Ås, Norway

⁴Aqua Gen AS, Trondheim, Norway

⁵Centre for Biomedical Research, Department of Biology, University of Victoria, Victoria, British Columbia, Canada

⁶Department of Molecular Biology and Biochemistry, Simon Fraser University, Burnaby, British Columbia, Canada

author email corresponding author email

BMC Genomics 2008, 9:223doi:10.1186/1471-2164-9-223


Published:	15 May 2008

Additional files

Additional file 1:

Properties of SNP markers used in the study. Excel workbook containing IDs of SNPs, contigs sequences w/SNP sequence and position, allele frequencies, heterozygosities, and BLASTX hits

Format: XLS Size: 458KB Download file

This file can be viewed with: Microsoft Excel Viewer

Additional file 2:

Atlantic salmon linkage map. Linkage map in Excel format.

Format: XLS Size: 69KB Download file

This file can be viewed with: Microsoft Excel Viewer

Additional file 3:

Marker pairs with male-female order discrepancies. Marker pairs for which marker order were inverted in one map relative to the other.

Format: XLS Size: 23KB Download file

This file can be viewed with: Microsoft Excel Viewer