Table 4 |
||
|
Pearson correlation coefficients of the expression profiles of HvWRKY genes and their designate AtWRKY orthologs. |
||
|
HvWRKY |
AtWRKY |
Correlation coefficient |
|
|
||
|
HvWRKY1 |
AtWRKY18 |
0.06 |
|
AtWRKY40 |
-0.11 |
|
|
AtWRKY60 |
-0.18 |
|
|
HvWRKY2 |
AtWRKY18 |
-0.05 |
|
AtWRKY40 |
-0.10 |
|
|
AtWRKY60 |
-0.31 |
|
|
HvWRKY3 |
AtWRKY18 |
0.21 |
|
AtWRKY40 |
-0.24 |
|
|
AtWRKY60 |
-0.11 |
|
|
HvWRKY4 |
AtWRKY54 |
0.52 |
|
AtWRKY70 |
0.23 |
|
|
HvWRKY6 |
AtWRKY1 |
0.41 |
|
AtWRKY32 |
0.45 |
|
|
HvWRKY7 |
AtWRKY11 |
0.38 |
|
AtWRKY17 |
0.66 |
|
|
HvWRKY8 |
AtWRKY39 |
0.20 |
|
AtWRKY74 |
0.30 |
|
|
HvWRKY9 |
AtWRKY7 |
-0.49 |
|
AtWRKY15 |
0.12 |
|
|
HvWRKY13 |
AtWRKY43 |
0.82 |
|
AtWRKY56 |
0.54 |
|
|
HvWRKY23 |
AtWRKY30 |
0.33 |
|
AtWRKY53 |
0.39 |
|
|
HvWRKY28 |
AtWRKY30 |
-0.12 |
|
AtWRKY53 |
-0.07 |
|
|
HvWRKY32 |
AtWRKY54 |
0.70 |
|
AtWRKY70 |
0.42 |
|
|
HvWRKY34 |
AtWRKY55 |
-0.37 |
|
HvWRKY39 |
AtWRKY65 |
0.88 |
|
AtWRKY69 |
0.91 |
|
|
HvWRKY42 |
AtWRKY2 |
0.78 |
|
HvWRKY46 |
AtWRKY20 |
0.50 |
|
|
||
|
Average correlation all WRKY gene pairs |
0.24 |
|
|
Average correlation best correlated WRKY gene pairs* |
0.37 |
|
|
Average correlation random genes** |
0.01 |
|
|
|
||
|
* For each HvWRKY gene, the AtWRKY gene with the highest correlation value was chosen to calculate the average correlation of best pairs. ** Correlation of 101 random genes of barley and Arabidopsis. Probesets on the Barley1 GeneChip and ATH1 GeneChip were randomly selected and the average of the Pearson correlation of their expression profiles was calculated. |
||
|
Mangelsen et al. BMC Genomics 2008 9:194 doi:10.1186/1471-2164-9-194 |
||
