Additional file 11.
Interstitial rRNA. "rrna.psl" is the raw result of blat query for the genome with rRNA sequences. "rrna_overlapping_smallRNA.txt" and "rrna_overlapping_cage.txt" list the rrna aligned regions overlapping with the small RNA and the CAGE, respectively.
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Kawaji et al. BMC Genomics 2008 9:157 doi:10.1186/1471-2164-9-157