Table 1

Annotation-based filtering of candidate novel and intergenically spliced PET-based TUs.
Selection process
 Initial dataset
 Genomic span > 200 kb
 Halftag/s within repeats
 Mapping to multiple loci
 Unmappable to the genome
 No longer novel
 Final PETs
Novel
 143
 48
 48
 26
 10
 1
 10
Intergenic Splicing
 10
 -
 -
 -
 3
 1
 6
Total
 153
 48
 48
 26
 13
 2
 16

The numbers refer to PET counts in each named category corresponding to annotation-based filtering described in the text. The 'Mapping to multiple loci' and 'Unmappable to the genome' columns are the combined results of both In-Silico PCR and BLASTN.

Kunarso et al. BMC Genomics 2008 9:155   doi:10.1186/1471-2164-9-155