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MADIBA: A web server toolkit for biological interpretation of Plasmodium and plant gene clusters

Philip J Law†, Clotilde Claudel-Renard†, Fourie Joubert, Abraham I Louw and Dave K Berger*

BMC Genomics 2008, 9:105 doi:10.1186/1471-2164-9-105

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In vitro anti-plasmodial activity of Dicoma anomala subsp. gerrardii (Asteraceae): identification of its main active constituent, structure-activity relationship studies and gene expression profiling

John VW Becker, Marina M van der Merwe, Anna C van Brummelen, Pamisha Pillay, Bridget G Crampton, Edwin M Mmutlane, Chris Parkinson, Fanie R van Heerden, Neil R Crouch, Peter J Smith, Dalu T Mancama, Vinesh J Maharaj Malaria Journal 2011, 10:295 (11 October 2011)

Abstract | Full text | PDF | PubMed |  Editor’s summary

Paper investigates the anti-plasmodial effect of the South African medicinal plant Dicoma anomala subsp. gerrardii, based on its ethnomedicinal profile. Using conventional fractionation and purification techniques, authors were able by various chemical techniques to identify the most active anti-plasmodial compound in the in vitro P. falciparum as dehydrobrachylaenolide, a sesquiterpene lactone.

Database   Open Access

Maize microarray annotation database

Nanette Coetzer, Alexander A Myburg, Dave K Berger Plant Methods 2011, 7:31 (1 October 2011)

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Research article   Open Access

The landscape of inherited and de novo copy number variants in a plasmodium falciparum genetic cross

Upeka Samarakoon, Joseph M Gonzales, Jigar J Patel, Asako Tan, Lisa Checkley, Michael T Ferdig BMC Genomics 2011, 12:457 (22 September 2011)

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Research article   Open Access

Plasmodium falciparum spermidine synthase inhibition results in unique perturbation-specific effects observed on transcript, protein and metabolite levels

John VW Becker, Linda Mtwisha, Bridget G Crampton, Stoyan Stoychev, Anna C van Brummelen, Shaun Reeksting, Abraham I Louw, Lyn-Marie Birkholtz, Dalu T Mancama BMC Genomics 2010, 11:235 (12 April 2010)

Abstract | Full text | PDF | PubMed | Cited on BioMed Central

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