Table 3

TGF-β regulated genes (19) in HPL1D involved in focal adhesion

Acc No

DAVID Gene Name

1 hr

4 hr

12 hr


AA031376

PLACENTAL GROWTH FACTOR, VASCULAR ENDOTHELIAL GROWTH FACTOR-RELATED PROTEIN

1.18 ± 0.47

1.36 ± 0.05

1.16 ± 0.04

AA046597

INTEGRIN, BETA 4

1.63 ± 0.14

1.57 ± 0

1.43 ± 0.07

AA131272

INTEGRIN, ALPHA 8

1.19 ± 0

1.38 ± 0.06

0.96 ± 0.02

AW959692

VASCULAR ENDOTHELIAL GROWTH FACTOR C

1.15 ± 0.17

1.34 ± 0.02

1.44 ± 0.31

N74737

COLLAGEN, TYPE IV, ALPHA 2

0.84 ± 0.01

1 ± 0.04

1.51 ± 0.01

AA030029

PROTEIN KINASE C, ALPHA

1.3 ± 0

1.14 ± 0.03

1.1 ± 0.07

AL079948

THROMBOSPONDIN 1

0.78 ±

1.82 ± 0.09

2.5 ± 0.1

H73128

INTEGRIN, BETA 5

1.06 ± 0.03

1.21 ± 0.03

1.47 ± 0.11

BM924824

RAS-RELATED C3 BOTULINUM TOXIN SUBSTRATE 1 (RHO FAMILY, SMALL GTP BINDING PROTEIN RAC1)

1.11 ± 0.08

1.14 ± 0.03

1.55 ± 0.07

BM801832

CAVEOLIN 1, CAVEOLAE PROTEIN, 22 KDA

1.09 ± 0.11

1.4 ± 0.01

1.47 ± 0

W67710

PLATELET-DERIVED GROWTH FACTOR BETA POLYPEPTIDE (SIMIAN SARCOMA VIRAL (V-SIS) ONCOGENE HOMOLOG)

1.53 ± 0.07

1.17 ± 0.02

1.2 ± 0.01

W20454

FIBRONECTIN 1

1.23 ± 0

1.36 ± 0.04

2.1 ± 0.19

AA029359

LAMININ, BETA 2 (LAMININ S)

1.54 ± 0.06

1.17 ± 0.08

1.02 ± 0.06

W39107

RAS HOMOLOG GENE FAMILY, MEMBER A

1.37 ± 0.05

1.07 ± 0.04

1.14 ± 0.16

AA043301

COLLAGEN, TYPE IV, ALPHA 1

1.4 ± 0.19

1.52 ±

1.52 ± 0.03

BQ017489

ACTININ, ALPHA 1

1.42 ± 0.03

1.02 ± 0.11

1.53 ± 0.2

AA010526

GLUCOCORTICOID RECEPTOR DNA BINDING FACTOR 1

1.37 ± 0.26

1.29 ± 0.07

1.36 ± 0.02

R14058

PROTEIN KINASE C, BETA 1

1.34 ± 0.02

0.81 ± 0.1

0.94 ± 0.03

H58824

DIAPHANOUS HOMOLOG 1 (DROSOPHILA)

0.84 ± 0.1

1.57 ± 0.19

1 ± 0.11


For description see legend of table 2

Ranganathan et al. BMC Genomics 2007 8:98   doi:10.1186/1471-2164-8-98

Open Data