Identification and characterization of insect-specific proteins by genome data analysis

doi:10.1186/1471-2164-8-93

BMC Genomics

Volume 8

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Research article

Identification and characterization of insect-specific proteins by genome data analysis

Guojie Zhang¹^,2^,3^* , Hongsheng Wang¹^* , Junjie Shi²^* , Xiaoling Wang² , Hongkun Zheng² , Gane Ka-Shu Wong² , Terry Clark⁴ , Wen Wang³ , Jun Wang²^,5 and Le Kang¹

¹State Key Laboratory of Integrated Management of Pest Insects and Rodents, Institute of Zoology Chinese Academy of Sciences, Haidian Beijing 100080, China

²Beijing Institute of Genomics of Chinese Academy of Sciences, Beijing Genomics Institute, Beijing 101300, China

³CAS-Max Plank Junior Research Group, Key Laboratory of Cellular and Molecular Evolution, Kunming Institute of Zoology, Chinese Academy of Science (CAS), Kunming, Yunnan 650223, China

⁴Department of Electrical Engineering and Computer Science, The University of Kansas, 2001 Eaton Hall, Lawrence, KS 66044, USA

⁵Department of Biochemistry and Molecular Biology, University of Southern Denmark, DK-5230, Odense M, Denmark

author email corresponding author email* Contributed equally

BMC Genomics 2007, 8:93doi:10.1186/1471-2164-8-93


Published:	4 April 2007

Additional files

Additional file 1:

Insect-specific proteins from five whole genomes of insects. Proteins homologs in the five whole insect genomes were listed in this table.

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Additional file 2:

Refined insect-specific proteins. The refined 51 insect-specific proteins are listed in the table with Ka/Ks, Interpro annotations, GO terms, mutant phenotypes, and homologs with other insects. GO terms were downloaded from the Gene Ontology Consortium. Mutant phenotypes were downloaded from FlyBase. Proteins with significant mutant phenotypes are highlighted in red.

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Additional file 3:

Eukaryote/opisthokont core proteins. A list of 466 eukaryote/opisthokont core proteins with horologes in five insects was presented.

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