BMC Genomics

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Open Access

De novo identification of LTR retrotransposons in eukaryotic genomes

Mina Rho, Jeong-Hyeon Choi, Sun Kim, Michael Lynch and Haixu Tang*

BMC Genomics 2007, 8:90 doi:10.1186/1471-2164-8-90

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Research article   Open Access

LTR retroelements in the genome of Daphnia pulex

Mina Rho, Sarah Schaack, Xiang Gao, Sun Kim, Michael Lynch, Haixu Tang BMC Genomics 2010, 11:425 (9 July 2010)

This article is part of a collection on Daphnia: the companion...

Software   Open Access

The DAWGPAWS pipeline for the annotation of genes and transposable elements in plant genomes

James C Estill, Jeffrey L Bennetzen Plant Methods 2009, 5:8 (19 June 2009)

Research article   Open Access

DIRS1-like retrotransposons are widely distributed among Decapoda and are particularly present in hydrothermal vent organisms

Mathieu Piednoƫl, Eric Bonnivard BMC Evolutionary Biology 2009, 9:86 (28 April 2009)

Research article   Open Access

LTR retrotransposons reveal recent extensive inter-subspecies nonreciprocal recombination in Asian cultivated rice

Hao Wang, Zhao Xu, Hongjie Yu BMC Genomics 2008, 9:565 (27 November 2008)

Research article   Open Access

Just how versatile are domains?

January Weiner, Andrew D Moore, Erich Bornberg-Bauer BMC Evolutionary Biology 2008, 8:285 (14 October 2008)

Research article   Open Access

LTR retrotransposon landscape in Medicago truncatula: more rapid removal than in rice

Hao Wang, Jin-Song Liu BMC Genomics 2008, 9:382 (10 August 2008)

Software   Open Access

LTRharvest, an efficient and flexible software for de novo detection of LTR retrotransposons

David Ellinghaus, Stefan Kurtz, Ute Willhoeft BMC Bioinformatics 2008, 9:18 (14 January 2008)