Additional file 1.

SUCAST SAS showing differential expression in response to the applied treatments. The table lists all SAS whose expression was enriched or decreased in both biological samples for each experimental point. The plus sign indicates that the SAS expression is up-regulated, the minus sign indicates that the gene expression is down-regulated. The asterisk indicates that the SAS identity was not confirmed by re-sequencing. The table also shows the expression profile of these genes in six sugarcane tissues (**revised from [27]). The last four columns indicate the SOM groups in which these SAS were included (numbered according to Figure 1). The expression data for sugarcane tissues were inferred from microarray hybridizations of tissue samples against a common reference constituted by an equimolar mixture of the tissues sampled [27]. FL = flowers, LB = lateral buds, LV = leaves, RT = roots, IN1 = first internodes, IN4 = fourth internodes, PD = phosphate deficiency, H = inoculation with Herbaspirillum spp., GD = inoculation with Gluconacetobacter diazotrophicus.

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Rocha et al. BMC Genomics 2007 8:71   doi:10.1186/1471-2164-8-71