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Open AccessHighly AccessResearch article

A genomic survey of the fish parasite Spironucleus salmonicida indicates genomic plasticity among diplomonads and significant lateral gene transfer in eukaryote genome evolution

Jan O Andersson1 email, Åsa M Sjögren2,6 email, David S Horner3,7 email, Colleen A Murphy4 email, Patricia L Dyal3 email, Staffan G Svärd1 email, John M Logsdon Jr5 email, Mark A Ragan4,8 email, Robert P Hirt3,9 email and Andrew J Roger2 email

Institute of Cell and Molecular Biology, Uppsala University, Biomedical Center, Uppsala, Sweden

The Canadian Institute for Advanced Research, Program in Evolutionary Biology, Department of Biochemistry and Molecular Biology, Dalhousie University, Halifax, Nova Scotia, Canada

Department of Zoology, The Natural History Museum, London, UK

Institute for Marine Biosciences, National Research Council of Canada, Halifax, Nova Scotia, Canada

Roy J. Carver Center for Comparative Genomics, Department of Biological Sciences, University of Iowa, Iowa City, USA

Department of Microbiology, Swedish University of Agricultural Sciences, Uppsala, Sweden

Dipartimento di Scienze Biomolecolare e Biotecnologie, University of Milan, Milan, Italy

ARC Centre in Bioinformatics, and Institute for Molecular Bioscience, The University of Queensland, Brisbane, Australia

School of Biology, The Devonshire building, The University of Newcastle upon Tyne, UK

author email corresponding author email

BMC Genomics 2007, 8:51doi:10.1186/1471-2164-8-51

Published: 14 February 2007

Additional files

Additional file 1:

A table showing the characteristics of the finished contigs.

Format: PDF Size: 11KB Download file

This file can be viewed with: Adobe Acrobat Reader

Additional file 2:

Complete list of gene annotations.

Format: PDF Size: 55KB Download file

This file can be viewed with: Adobe Acrobat Reader

Additional file 3:

A table showing the genes putatively involved in LGT events.

Format: PDF Size: 27KB Download file

This file can be viewed with: Adobe Acrobat Reader

Additional file 4:

Phylogenetic trees 1–25 for genes putatively involved in LGT events and listed in Additional file 3.

Format: PDF Size: 7.2MB Download file

This file can be viewed with: Adobe Acrobat Reader

Additional file 5:

Phylogenetic trees 26–50 for genes putatively involved in LGT events and listed in Additional file 3.

Format: PDF Size: 7.9MB Download file

This file can be viewed with: Adobe Acrobat Reader

Additional file 6:

Phylogenetic trees 51–72 for genes putatively involved in LGT events and listed in Additional file 3.

Format: PDF Size: 5.8MB Download file

This file can be viewed with: Adobe Acrobat Reader


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