The fungus Ustilago maydis and humans share disease-related proteins that are not found in Saccharomyces cerevisiae

Martin Münsterkötter¹ and Gero Steinberg²^,3

¹Munich Information Center for Protein Sequences/Institute of Bioinformatics and Systems Biology, Helmholz Zentrum München, Germany

²Max-Planck-Institut für terrestrische Mikrobiologie, Marburg, Germany

³School of Bioscience, Stocker Rd., Exeter University, EX4 4QD, UK

author email corresponding author email

BMC Genomics 2007, 8:473doi:10.1186/1471-2164-8-473


Published:	20 December 2007

Additional files

Additional file 1:

List of all Ustilago maydis proteins with higher conservation to Homo sapiens than to Saccharomyces cerevisiae. Listed are the U. maydis code, the %identity over protein length to H. sapiens and the % identity over protein length to S. cerevisiae, based on the Smith-Waterman comparison of all proteins between the genomes, a flag (1) for a best bidirectional hit, H. sapiens code, the alternative best reciprocal U. maydis code, the %identity over protein length of the best reciprocal hit and comments (The U. maydis annotation is still ongoing, please find here existing new gene models). List of alternative Best Recipropal Hits of the U. maydis-to-H. sapiens set. Listed are all best recipropal U. maydis codes, their amount and their relation to the U. maydis-to-H. sapiens set.

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