Diversity in conserved genes in tomato

doi:10.1186/1471-2164-8-465

BMC Genomics

Volume 8

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Van Deynze A
Stoffel K
Buell CR
Kozik A
Liu J
van der Knaap E
Francis D

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Stoffel K
Buell CR
Kozik A
Liu J
van der Knaap E
Francis D
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Research article

Diversity in conserved genes in tomato

Allen Van Deynze¹ , Kevin Stoffel¹ , C Robin Buell²^,3 , Alexander Kozik⁴ , Jia Liu² , Esther van der Knaap⁵ and David Francis⁵

¹Seed Biotechnology Center, University of California, 1 Shields Ave., Davis, CA, USA

²The Institute for Genomic Research, 9712 Medical Center Dr, Rockville, MD, USA

³Department of Plant Biology, Michigan State University, 166 Plant Biology, East Lansing, MI, USA

⁴Genome and Biomedical Sciences Facility, University of California, 1 Shields Ave., Davis, CA, USA

⁵Department of Horticulture and Crop Science, The Ohio State University/OARDC, 1680 Madison Ave, Wooster, OH, USA

author email corresponding author email

BMC Genomics 2007, 8:465doi:10.1186/1471-2164-8-465


Published:	18 December 2007

Additional files

additional file 1:

Table S1. Cross-reference of 1704 UC Davis COS to Tomato0607 unigene build and SGN COS II[14]. Table S2. SNP genotypes for 12 lines in tomato and 302 UCDCOS ESTs. Table S3. Indel genotypes for 12 lines in tomato and 153 UCD COS ESTs. Table S4. Polymorphisms due to SNPs (a) and Indels (b) among lines. Table S5. SSR genotypes for 12 lines in tomato and 44 UCD COS ESTs. All raw sequences have been submitted to GenBank (#s ET165605 to ET166001).

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