BMC Genomics

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Open Access Highly Access Research article

Functional annotation of 19,841 Populus nigra full-length enriched cDNA clones

Tokihiko Nanjo1*, Tetsuya Sakurai2, Yasushi Totoki3, Atsushi Toyoda3, Mitsuru Nishiguchi1, Tomoyuki Kado4, Tomohiro Igasaki1, Norihiro Futamura1, Motoaki Seki2, Yoshiyuki Sakaki3, Kazuo Shinozaki2 and Kenji Shinohara1

Author Affiliations

1 Department of Molecular and Cell Biology, Forestry and Forest Products Research Institute (FFPRI), 1 Matsunosato, Tsukuba, Ibaraki 305-8687 JAPAN

2 RIKEN Plant Science Center, 1-7-22, Suehiro-cho, Tsurumi-ku, Yokohama, Kanagawa 230-0045 JAPAN

3 RIKEN Genomic Science Center, 1-7-22, Suehiro-cho, Tsurumi-ku, Yokohama, Kanagawa 230-0045 JAPAN

4 Hayama Center for Advanced Studies (HCAS), The Graduate University for Advanced Studies, Shonan Kokusai-mura, Hayama-cho, Miura, Kanagawa 240-0193 JAPAN

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BMC Genomics 2007, 8:448 doi:10.1186/1471-2164-8-448

Published: 3 December 2007

Additional files

Additional file 1:

List of DDBJ accession numbers in dbEST for the full-length enriched ESTs of P. nigra

Format: XLS Size: 2.8MB Download file

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Additional file 2:

BLASTX analysis of the 17,813 PnFL non-redundant ESTs against AtCDS, OsCDS and the Uniprot TrEMBL plant protein database.

Format: XLS Size: 8.9MB Download file

This file can be viewed with: Microsoft Excel Viewer

Open Data

Additional file 3:

BLASTX analysis and InterProScan of the 750 substituted Populus CDS

Format: XLS Size: 326KB Download file

This file can be viewed with: Microsoft Excel Viewer

Open Data