  Research articleComputational prediction and experimental validation of Ciona intestinalis microRNA genesTrina M Norden-Krichmar1 1 Scripps Institution of Oceanography, University of California, San Diego, 9500 Gilman Drive, MSC 0202, La Jolla, CA 92093 USA 2 Department of Biology, University of California, San Diego, La Jolla, CA 92093 USA
BMC Genomics 2007, 8:445doi:10.1186/1471-2164-8-445
Additional filesAdditional File 1: Analysis of the characteristics of known miRNAs. This file summarizes the miRNA statistics gathered for three pairs of closely related organisms: Caenorhabditis elegans vs. Caenorhabditis briggsae, Drosophila melanogaster vs. Drosophila pseudoobscura, and Homo sapiens vs. Pan troglodytes. Format: PDF Size: 346KB Download file This file can be viewed with: Adobe Acrobat Reader Additional File 2: List of predicted miRNAs for C. intestinalis and their corresponding probe sequences. This file lists the putative C. intestinalis miRNAs, their mature miRNA sequence, oligonucleotide probe sequence, scaffold number, coordinates, strand, position, and nearest neighboring gene. Format: XLS Size: 28KB Download file This file can be viewed with: Microsoft Excel Viewer Additional File 3: List of predicted miRNA targets for C. intestinalis. This file contains a list of the predicted targets with single and multiple hits to the 3'UTR region. Format: XLS Size: 41KB Download file This file can be viewed with: Microsoft Excel Viewer |
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