Table 4

RefSeq annotation for the twenty M. persicae contigs composed of the largest number of ESTs.

Rank

Contig ID

Number of ESTs

Gene Description

Predicted Mitochondrial Or Nuclear Location


1

1

268

12S small subunit ribosomal RNA gene

Mitochondrial

2

1194

155

unknown protein

Nuclear

3

2319

148

cytochrome c oxidase subunit III

Mitochondrial

4

3100

100

unknown protein

Nuclear

5

3675

67

ATP synthase F0 subunit 6

Mitochondrial

6

3801

60

ribosomal protein, large subunit

Nuclear

7

3543

59

cytochrome c oxidase subunit I

Mitochondrial

8

8

59

tentative cuticle protein

Nuclear

9

130

51

unknown protein

Nuclear

10

375

47

unknown protein

Nuclear

11

1079

43

unknown protein

Nuclear

12

1313

42

ribosomal protein S11

Nuclear

13

844

40

unknown protein

Nuclear

14

1429

39

ribosomal protein L10

Nuclear

15

3408

39

unknown protein

Nuclear

16

1768

37

ribosomal protein L11

Nuclear

17

1881

37

ribosomal protein S24

Nuclear

18

731

37

ribosomal protein S8

Nuclear

19

495

37

muscle LIM protein

Nuclear

20

254

36

cathepsin B

Nuclear


Ramsey et al. BMC Genomics 2007 8:423   doi:10.1186/1471-2164-8-423

Open Data