Table 2

Recovered transposon families found in sequences from other species.

Organism

Family

Genbank accession numbers


Acanthophthalmus kuhli

Tss

L48686

Astatotilapia burtoni

DT1

DQ386647

L41173

Carassius auratus

Tss

AY351357

Chasmistes brevirostris

Tss

AY351357

Cyprinus carpio

Tss

L48683

Danio rerio

DT1

CR753816

Danio rerio

DT2

CR790363

CR376861

Danio rerio

DT10

AL954144

Danio rerio

SALT1

CR450768

Deltistes luxatus

DT5

AF314683

Esox lucius

Tss

L41172

Gasterosteus aculeatus

SALT1

AC182753

Ictalurus punctatus

DT1

DQ400445

Oncorhynchus kisutch

Tss

DQ668034

Oncorhynchus mykiss

DT1

AB162342

Oncorhynchus mykiss

DT3

DQ246664

Oncorhynchus mykiss

SSTN1

AB162343

Oncorhynchus mykiss

DT13/14

AY872256

Oncorhynchus tshawytscha

SALT1

AY100012

Oryzias latipes

DT6

BA000027

Petromyzon marinus

DT1

AF464190

Polypterus bichir

DT10

AC132195

Rana pipens

DT10

AY261371

Salvelinus confluentus

DT7

AY788871

Salvelinus fontinalis

DT4

AY308064

Salvelinus namaycush

Tss

AF017232

Tanichthys albonubus

Tss

L48685

Xenopus laevis

DT10

U43662

Xenopus tropicalis

DT1

AC145794

AC148453

AC148466

AC149518

AC149594

AC149875

AC149881

AC155950

AC155952

Xenopus tropicalis

DT2

AC147826

AC166141

Xenopus tropicalis

DT10

AC147174


Genbank accession numbers indicate the sequence(s) in which the element was found.

de Boer et al. BMC Genomics 2007 8:422   doi:10.1186/1471-2164-8-422

Open Data