Table 1

Features of the 14 DNA transposon families found in Salmo salar.

Name

Insertion site

ITR end (4 bp)

ITR length (bp)

~Length (bp)§

Group


DTSsa01

5'-TA-3'

CAGT

200

1600

Tc1

DTSsa02

TA

CACT

~40

1600

Tc1

DTSsa03

TA

ND

ND

ND

Tc1

DTSsa04

TA

CAGT

244

1530

Tc1

DTSsa05

TA

AACT

~18

1440

Tc1

DTSsa06

ND

ND

ND

ND

Tc1

DTSsa07

TA

CACT

~20

ND

Tc1

SSTN1

TA

CAGT

206

1570

Tc1

DTSsa09

TA

CAGT

212

ND

Tc1

DTSsa10

TA

CAGT

199

ND

Tc1

Tss

TA

CAGT

243

ND

Tc1

SALT1

TA

CAGT

204

ND

Tc1

pTSsa1

TTAA

CCTG

~22

1440

piggyBac

pTSsa2

TTAA

CCTG

~22

1440

piggyBac


§: Approximate length of sequences

ND: Not determined

de Boer et al. BMC Genomics 2007 8:422   doi:10.1186/1471-2164-8-422

Open Data