Table 2

Physical and genetic structure of zones 1A-14.

Zone

Start (bp)

End (bp)

Left Gene

Right Gene

Size (kb)

# genes

b# RNAi Lethal

# Lethal Mutants


1A

8023387

8611252

F44B9.2

rha-2

588

151

39

12

1B

7945392

8023387

kle-2

F44B9.2

78

23

6

3

2A

7896734

7945392

ZK688.2

kle-2

49

14

5

0

2B

7476402

7896734

H14A12.5

ZK688.2

420

81

23

11

3

7395219

7476402

T20B12.9

H14A12.5

81

8

5

1

4

7277442

7395219

B0361.11

T20B12.9

118

35

11

1

5

6620106

7277442

Y40D12A.1

B0361.11

657

154

48

13

6

6559307

6620106

F27B3.5

Y40D12A.1

61

14

4

2

7

6200904

6562088

rpn-2

F27B3.5

361

97

25

15

8

6178994

6200951

nas-28

rpn-2

22

5

3

0

9

5662800

6178564

par-3

nas-28

516

123

29

7

a13

5637312

5664335

ckk-1

par-3

27

5

1

0

10

5565581

5637312

mlc-3

ckk-1

72

18

2

0

11

5107800

5565581

dpy-17

mlc-3

458

98

31

7 c(+/- 8)

12

4569043

5107800

F35G12.2

dpy-17

539

163

46

14 c(+/- 8)

13

3640101

4569043

C32A3.3

F35G21.1

929

204

54

13

14

3115819

3640101

Y53G8B.1

C32A3.3

524

85

21

9


aZones 11 and 12 are defined by dpy-17.

b RNAi Lethal encompasses all genes annotated in Wormbase (release WS170) as having either emb, let, lvl and/or ste phenotypes by RNAi.

c 8 lethal mutations have not been position right/left with respect to dpy-17.

Jones et al. BMC Genomics 2007 8:402   doi:10.1186/1471-2164-8-402

Open Data