BMC Genomics

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Open Access Database

Collembase: a repository for springtail genomics and soil quality assessment

Martijn JTN Timmermans1*, Muriel E de Boer1, Benjamin Nota1, Tjalf E de Boer1, Janine Mariën1, Rene M Klein-Lankhorst2, Nico M van Straalen1 and Dick Roelofs1

Author Affiliations

1 Vrije Universiteit, Institute of Ecological Science, Department of Animal Ecology, De Boelelaan 1085, 1081 HV, Amsterdam, The Netherlands

2 PRI Greenomics, Droevendaalse steeg 1, 6708 PB Wageningen, The Netherlands

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BMC Genomics 2007, 8:341 doi:10.1186/1471-2164-8-341

Published: 27 September 2007

Additional files

Additional file 1:

The six primer pairs that were used to test the normalization procedure.

Format: XLS Size: 22KB Download file

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Additional file 2:

Sequence length distribution of different clusters in the assembled dataset.

Format: PDF Size: 8KB Download file

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Additional file 3:

The clusters that were marked as putative bacterial contamination in Collembase.

Format: DOC Size: 27KB Download file

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Additional file 4:

Summary of the microsatellite analysis as generated by MISA http://pgrc.ipk-gatersleben.de/misa/ webcite.

Format: TXT Size: 2KB Download file

Open Data