Table 2

Percentage identity/similarity between T. castaneum and D. melanogaster non-nAChR subunit protein sequences. Proposed orthologs are shown in bold.

Subunit

Tcas_RDL

Tcas_GRD

Tcas_LCCH3

Tcas_GluCl

Tcas_HisCl1

Tcas_HisCl2

Tcas_pHCl

Tcas_8916

Tcas_12344

CLGC1

CLGC2

CLGC3

Linkage Group

chrUn_22

4

4

chrUn_11

4

1

2

4

1

8

8

8


RDL

69/73

24/37

27/43

22/34

19/32

20/33

17/31

21/35

19/31

17/31

16/30

15/30

GRD

25/38

54/62

24/38

21/34

18/33

18/32

15/26

34/48

17/30

17/29

17/30

14/30

LCCH3

31/48

27/43

73/82

25/42

23/40

25/39

17/34

24/38

20/36

18/36

17/36

17/34

GluCl

27/41

22/39

26/42

83/89

27/42

27/45

24/44

22/38

21/39

19/36

19/35

19/37

HisCl1

21/38

20/38

25/41

26/42

64/70

43/57

19/37

19/34

22/42

18/35

18/34

16/35

HisCl2

24/41

21/37

25/40

26/43

50/64

79/85

21/39

20/35

26/46

19/37

18/37

18/35

pHCl

18/33

15/28

17/32

23/40

19/36

19/36

68/74

15/27

17/34

21/36

18/31

19/35

CG8916

22/37

32/47

23/38

19/34

19/30

19/33

15/28

54/66

17/29

15/30

15/30

15/28

CG12344

22/39

21/35

20/36

21/39

25/44

25/45

19/36

16/30

54/71

18/33

17/32

18/35

CG6927

19/35

17/31

18/37

18/34

17/33

17/36

19/33

15/30

16/32

38/54

36/51

30/48

CG7589

18/35

16/31

20/39

19/36

17/34

18/35

18/31

16/34

18/34

37/56

36/52

32/51

CG11340

19/34

15/29

17/36

20/35

17/35

18/35

19/34

16/32

17/32

32/50

34/50

27/45

Ntr

8/21

9/23

10/23

9/25

10/24

11/25

11/26

8/20

8/23

8/23

8/21

9/28


Jones and Sattelle BMC Genomics 2007 8:327   doi:10.1186/1471-2164-8-327

Open Data