Table 1

Relative allele frequences of SNPs genotyped in 19 hay fever patients with extreme IgE phenotype and 19 non-atopic controls.
SNP Nr.	SNP name	SNP identifier	Allele 1	Relative frequence of allele 1 in case sample	Relative frequence of allele 1 in control sample

1	IL-2_1	rs2069772	T	0.58	0.83
2	IL-2_2	rs2069763	G	0.67	0.61
3	IL-10_4	rs1800894	G	1.00	1.00
4	IL-10_5	rs1800871	C	0.77	0.83
5	IL-10_6	rs1800872	C	0.77	0.83
6	TNFA_7	rs11565	C	0.85	0.92
7	TNFA_8	rs673	A	0.03	0.03
8	TNFA_9	rs1800629	A	0.16	0.05
9	TNFA_10	rs361525	A	0.11	0.03
10	IL4_11	rs2243246	T	0.95	0.86
11	IL4_12	rs2243250	C	1.00	1.00
12	IL4_13	rs34185442	C	1.00	1.00
13	IL4_14	rs2970874	C	1.00	0.97
14	IL6_16	rs1800797	G	0.63	0.60
15	IL6_16	rs1800796	G	1.00	1.00
16	IL6_17	rs1800795	G	0.63	0.47
17	IL4R_18	rs1801275	A	0.87	0.68
18	IL4R_19	rs1805011	C	0.05	0.13
19	IL4R_20	rs8832	G	0.75	0.62
20	IL4R_21	rs1805015	T	1.00	0.89
21	IL4R_22	rs1805010	A	0.70	0.56
22	IL12p40_23	rs3124	C	1.00	1.00
23	STAT6_24	rs167769	A	0.32	0.20
24	STAT6_25	rs324015	G	0.72	0.82
25	STAT6_26	rs703817	G	0.50	0.38
26*	STAT6_27	rs4559	A	0.27	0.25
27	IFNG_28	rs2234685	A	1.00	1.00
28	IFNG_29	rs1861493	T	0.69	0.69
29	IFNG_30	rs2234687	C	1.00	1.00
30*	IFNG_31	rs2430561	T	0.50	0.38
31	IFNGR2_34	rs1802585	C	1.00	1.00
32	IFNGR2_35	rs1059293	T	0.39	0.50
33	IFNGR2_36	rs9808753	A	0.86	0.94
34	IRF1_37	rs839	G	0.74	0.89
35*	IRF1_38	rs9282762	A	0.42	0.60
36*	IRF2_40	rs1131553	G	0.32	0.50
37	IL8_41	rs1175	A	0.41	0.47
38	IL8_42	rs2227307	G	0.42	0.50
39	IL13_43	rs20541	G	0.89	0.79
40	IL13_44	rs1800925	C	0.88	0.82
41*	IL18_47	rs1946518	G	0.63	0.67
42*	IL18_48	rs1946519	C	0.87	0.71
43*	IL1B_49	rs16944	T	0.16	0.15
44	IL1B_50	rs1143627	C	0.36	0.38
45	IL1B_51	rs1799916	T	1.00	1.00
46	IL1A_52	rs17561	G	0.64	0.74
47	IL1A_53	rs1800587	T	0.36	0.31
48	IL9_56	rs1799962	A	1.00	1.00
49	TNFR1_60	rs1800692	C	0.63	0.53
50	TNFR1_61	rs1800693	A	0.53	0.72
51*	TNFRSF6_62	rs2234768	T	0.00	1.00
52	LTA_65	rs1800683	A	1.00	1.00
53	LTA_66	rs1041981	A	0.29	0.19
54	LTA_67	rs909253	G	0.25	0.19
55	IL1RN_68	rs2234676	G	0.86	0.74
56	IL1RN_69	rs419598	T	0.87	0.88
57	CTLA4_70	rs2384137	G	0.11	0.06
58	NFKBIA_72	rs1800439	G	0.53	0.56
59	IL8RB_77	rs2230054	T	0.06	0.17
60	ICAM1_78	rs1799969	A	1.00	0.97
61*	ICAM1_79	rs5498	G	0.61	0.64
62	IL3_81	rs40401	G	0.95	0.94
63	IL3_82	rs31480	G	0.84	0.82
64	MCP1_87	rs4611511	A	0.89	0.92
65	MCP1_88	rs34020694	A	0.87	0.87
66	RANTES_89	rs2107538	G	0.88	0.91
67	RANTES_90	rs2280788	C	0.95	0.95
68	CCR5_91	rs1799863	A	0.03	0.00
69	CCR2_94	rs1799865	T	0.50	0.56
70	C5_95	rs17611	G	0.66	0.50
71	C5_96	rs17612	C	0.11	0.06
72	P2X7_97	rs3751143	C	0.06	0.03
73	IL7R_106	rs1494555	G	0.34	0.35
74	PRF1_107	rs885822	T	0.83	0.94
75	TLR2_108	rs1804965	G	1.00	1.00
76	TCL1B_109	rs1064017	G	0.44	0.56
77	CCR5_110	rs1800452	G	1.00	1.00
78	IL11_111	rs1126757	A	0.38	0.44
79	IL11_112	rs2298885	G	0.61	0.85
80	IL8RA_117	rs2234671	G	0.40	0.44
81*	IL1L1_118	rs1800930	A	0.78	0.83
82*	CD36_119	rs1334512	G	0.96	0.85
83	VDR_121	rs1544410	G	0.31	0.44
84*	VDR_122	rs7975232	T	0.73	0.54
85	IL5RA_123	rs2290610	A	0.83	0.61
86	IL5R_124	rs2069812	C	0.79	0.78
87	IL5R_125	rs2069818	C	1.00	1.00
88	CX3CR1_126	rs3732379	G	0.68	0.67
89	CX3CR1_127	rs3732378	C	0.78	0.74
90*	TNFRSF1B_128	rs1061622	T	0.88	0.65
91	TNFRSF1B_129	rs1061624	A	0.31	0.47
92	TNFRSF1B_130	rs3397	T	0.88	0.79
93*	TNFRSF1A_131	rs887477	G	0.54	0.35
94	TNFRSF1A_132	rs4149570	G	0.76	0.53
95	IL4R_135	rs1805016	T	1.00	1.00
96	IL6_137	rs20069860	A	0.97	1.00
97*	IL9_138	rs20069885	C	1.00	0.96
98*	NKFB_139	rs1020759	C	1.00	1.00
99	GATA3_141	rs57013	A	0.72	0.58

* The SNP detection reproducibility <80%
Pullat et al. BMC Genomics 2007 8:282 doi:10.1186/1471-2164-8-282