Tissue-specific mRNA expression profiling in grape berry tissues

doi:10.1186/1471-2164-8-187

BMC Genomics

Volume 8

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Grimplet J
Deluc LG
Tillett RL
Wheatley MD
Schlauch KA
Cramer GR
Cushman JC

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Deluc LG
Tillett RL
Wheatley MD
Schlauch KA
Cramer GR
Cushman JC
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Research article

Tissue-specific mRNA expression profiling in grape berry tissues

Jerome Grimplet¹ , Laurent G Deluc¹ , Richard L Tillett¹ , Matthew D Wheatley¹ , Karen A Schlauch² , Grant R Cramer¹ and John C Cushman¹

¹Department of Biochemistry and Molecular Biology, Mail Stop 200, University of Nevada, Reno, NV 89557, USA

²Department of Genetics and Genomics, Boston University School of Medicine, Boston, MA, 02118, USA

author email corresponding author email

BMC Genomics 2007, 8:187doi:10.1186/1471-2164-8-187


Published:	21 June 2007

Additional files

Additional file 1:

Heatmap and dendrogram of the 12 hierarchical clusters (A-L) defined for the three major tissues of grape berry (pulp, skin, seed) by clustering of log₂ratios of RMA values relative to the average value among the three tissues. The color scale indicates the extent of expression change: black (0), red (1+) to green (-1).

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Additional file 2:

Table of primers used for quantitative reverse transcription-polymerase chain reaction (qRT-PCR).

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Additional file 3:

Tables 1–13. Expression and putative function of relevant transcripts differentially expressed among tissues in berries harvested from well-watered vines.

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Additional file 4:

Tables 14–21. Expression and putative function of relevant transcripts differentially expressed in one or more berry tissues according to water status.

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Additional file 5:

Tables 22 and 23. Expression and putative function of all differentially expressed transcripts expressed in one or more berry tissues according to water status.

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