Research article
Tissue-specific mRNA expression profiling in grape berry tissues
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* Corresponding author: John C Cushman jcushman@unr.edu
1 Department of Biochemistry and Molecular Biology, Mail Stop 200, University of Nevada, Reno, NV 89557, USA
2 Department of Genetics and Genomics, Boston University School of Medicine, Boston, MA, 02118, USA
BMC Genomics 2007, 8:187 doi:10.1186/1471-2164-8-187
Published: 21 June 2007Additional files
Additional file 1:
Heatmap and dendrogram of the 12 hierarchical clusters (A-L) defined for the three major tissues of grape berry (pulp, skin, seed) by clustering of log2 ratios of RMA values relative to the average value among the three tissues. The color scale indicates the extent of expression change: black (0), red (1+) to green (-1).
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Additional file 2:
Table of primers used for quantitative reverse transcription-polymerase chain reaction (qRT-PCR).
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Additional file 3:
Tables 1–13. Expression and putative function of relevant transcripts differentially expressed among tissues in berries harvested from well-watered vines.
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Additional file 4:
Tables 14–21. Expression and putative function of relevant transcripts differentially expressed in one or more berry tissues according to water status.
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Additional file 5:
Tables 22 and 23. Expression and putative function of all differentially expressed transcripts expressed in one or more berry tissues according to water status.
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