Table 2 |
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|
Correlation of expression patterns in human normal tissues between intronic miRNAs and their host genes. |
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|
miRNA |
Host Gene |
p value* |
Gene Description |
|
|
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|
miR-106b |
MCM7 |
0.047** |
MCM7 minichromosome maintenance deficient 7 (S. cerevisiae) |
|
miR-107 |
PANK1 |
0.022 |
pantothenate kinase 1 |
|
miR-126 |
EGFL7 |
0.027 |
EGF-like-domain, multiple 7 |
|
miR-128a |
R3HDM1 |
0.002 |
R3H domain (binds single-stranded nucleic acids) containing 1 |
|
miR-128b |
ARPP-21 |
0.001 |
cyclic AMP-regulated phosphoprotein, 21 kD |
|
miR-139 |
PDE2A |
0.007 |
phosphodiesterase 2A, cGMP-stimulated |
|
miR-140 |
AIP2 |
0.249 |
WW domain containing E3 ubiquitin protein ligase 2 |
|
miR-148b |
COPZ1 |
0.472 |
coatomer protein complex, subunit zeta 1 |
|
miR-149 |
GPC1 |
0.053 |
glypican 1 |
|
miR-151 |
PTK2 |
0.031 |
protein tyrosine kinase 2; focal adhesion kinase 1 |
|
miR-15b |
SMC4L1 |
0.003 |
SMC4 structural maintenance of chromosomes 4-like 1 (yeast) |
|
miR-186 |
ZNF265 |
0.335 |
zinc finger protein 265 |
|
miR-188 |
CLCN5 |
0.07 |
chloride channel 5 (nephrolithiasis 2, X-linked, Dent disease) |
|
miR-190 |
TLN2 |
0.001 |
talin 2 |
|
miR-196b |
HOXA9 |
0.005 |
homeo box A9 |
|
miR-204 |
TRPM3 |
0.009 |
transient receptor potential cation channel, subfamily M, member 3 |
|
miR-208 |
MYH6 |
6 × 10-30 |
myosin, heavy polypeptide 6, cardiac muscle, alpha |
|
miR-211 |
TRPM1 |
0.004 |
transient receptor potential cation channel, subfamily M, member 1 |
|
miR-224 |
GABRE |
0.006 |
gamma-aminobutyric acid (GABA) A receptor, epsilon |
|
miR-25 |
MCM7 |
0.022 |
MCM7 minichromosome maintenance deficient 7 (S. cerevisiae) |
|
miR-28 |
LPP |
0.023 |
LIM domain containing preferred translocation partner in lipoma |
|
miR-30e |
NFYC |
0.618 |
nuclear transcription factor Y, gamma |
|
miR-326 |
ARRB1 |
0.013 |
arrestin, beta 1 |
|
miR-33 |
SREBF2 |
0.287 |
sterol regulatory element binding transcription factor 2 |
|
miR-335 |
MEST |
0.006 |
mesoderm specific transcript homolog (mouse) |
|
miR-338 |
AATK |
0.0003 |
apoptosis-associated tyrosine kinase |
|
miR-340 |
RNF130 |
0.346 |
ring finger protein 130 |
|
miR-342 |
EVL |
0.017 |
Enah/Vasp-like |
|
miR-346 |
GRID1 |
0.895 |
glutamate receptor, ionotropic, delta 1 |
|
miR-452 |
GABRE |
0.0001 |
gamma-aminobutyric acid (GABA) A receptor, epsilon |
|
miR-93 |
MCM7 |
0.022 |
MCM7 minichromosome maintenance deficient 7 (S. cerevisiae) |
|
|
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|
*When multiple clones are available in the database, the clone with the best p value was chosen. **Pearson correlation; bold-type numbers indicate those with p values > 0.07 |
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|
Liang et al. BMC Genomics 2007 8:166 doi:10.1186/1471-2164-8-166 |
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