Figure 2.

Replicate correlations for tumor 248. Plot shows signals from all background subtracted non-control features of 8 replicate hybridization pairs (16 arrays total) for tumor 248. All of the individual features from all of the16 arrays are plotted. One of each replicate pair is plotted on the x-axis, the other is on the y-axis. Green data points are the Cy3 channel, red data points are the Cy5 channel.