BMC Genomics

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Open Access

Putative null distributions corresponding to tests of differential expression in the Golden Spike dataset are intensity dependent

Daniel P Gaile and Jeffrey C Miecznikowski

BMC Genomics 2007, 8:105 doi:10.1186/1471-2164-8-105

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Methodology article   Open Access

Bayesian optimal discovery procedure for simultaneous significance testing

Jing Cao, Xian-Jin Xie, Song Zhang, Angelique Whitehurst, Michael A White BMC Bioinformatics 2009, 10:5 (6 January 2009)

Methodology article   Open Access

Background correction using dinucleotide affinities improves the performance of GCRMA

Raad Z Gharaibeh, Anthony A Fodor, Cynthia J Gibas BMC Bioinformatics 2008, 9:452 (23 October 2008)

Research article   Open Access

A comprehensive re-analysis of the Golden Spike data: Towards a benchmark for differential expression methods

Richard D Pearson BMC Bioinformatics 2008, 9:164 (26 March 2008)

Methodology article   Open Access Highly Accessed

Empirical Bayes models for multiple probe type microarrays at the probe level

Magnus Åstrand, Petter Mostad, Mats Rudemo BMC Bioinformatics 2008, 9:156 (20 March 2008)