Microsatellite polymorphism across the M. tuberculosis and M. bovis genomes: Implications on genome evolution and plasticity

doi:10.1186/1471-2164-7-78

BMC Genomics

Volume 7

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Research article

Microsatellite polymorphism across the M. tuberculosis and M. bovis genomes: Implications on genome evolution and plasticity

Vattipally B Sreenu¹^* , Pankaj Kumar¹^* , Javaregowda Nagaraju² and Hampapathalu A Nagarajaram¹

¹Laboratory of Computational Biology, Centre for DNA Fingerprinting and Diagnostics, ECIL Road, Nacharam, Hyderabad-76, A.P., India

²Laboratory of Molecular Genetics, Centre for DNA Fingerprinting and Diagnostics, ECIL Road, Nacharam, Hyderabad-76, A.P., India

author email corresponding author email* Contributed equally

BMC Genomics 2006, 7:78doi:10.1186/1471-2164-7-78


Published:	10 April 2006

Additional files

Additional File 1:

List of ORFs from M. tuberculosis H37Rv (MTH), M. tuberculosis CDC1551 (MTC) and M. bovis (MB) harboring polymorphic microsatellite tracts. The complete list of the polymorphic microsatellites from the mycobacterial genomes, M.tuberculosis H37Rv, M.tuberculosis CDC1551 and M.bovis, along with the alignments of microsatellite tracts and flanking sequences. This list provides locations of microsatellite in the genomes, microsatellite variation, details of microsatellite position in protein with respect to amino acid sequence, local sequence of the of the microsatellite tract, start and end positions of the ORF, which contains the microsatellite, coding strand information (same strand:'+', template strand:'-'), GenBank ID of a protein, function of protein and protein length

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