Table 2

A Summary of genes performing alerted transcription due to delection of SO1377 gene

Function categories1

Significant2

Total

Ratio (%)


Amino acid biosynthesis

2

76

2.6

Biosynthesis of cofactor, prosthetic groups and carriers

3

104

2.9

Cell envelope

8

170

4.7

Cellular processes

14

238

5.9

Central intermediary metabolism

3

48

6.3

DNA metabolism

3

134

2.2

Energy metabolism

26

276

9.4

Fatty acid and phospholipid metabolism

1

55

1.8

Protein fate

2

180

1.1

Protein synthesis

3

136

2.2

Purines, pyrimidines, nucleosides and nucleotides

1

56

1.8

Regulatory functions

6

200

3.0

Signal transduction

4

63

6.3

Transcription

3

53

5.7

Transport and binding proteins

21

251

8.4

Others/Unknown function

15

553

2.7

Hypothetical proteins

70

2087

3.4


1Function categories are based on the annotation of TIGR. 2Expression changes are considered as significant (<0.05 probability in Student's t-test and >1.5 cutoff value for fold change).

Gao et al. BMC Genomics 2006 7:76   doi:10.1186/1471-2164-7-76

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