BMC Genomics

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A comparison of alternative 60-mer probe designs in an in-situ synthesized oligonucleotide microarray

Danielle L Leiske, Anis Karimpour-Fard, Patrick S Hume, Benjamin D Fairbanks and Ryan T Gill*

BMC Genomics 2006, 7:72 doi:10.1186/1471-2164-7-72

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Research article   Open Access Highly Accessed

Transcriptome profiling of low temperature-treated cassava apical shoots showed dynamic responses of tropical plant to cold stress

Dong An, Jun Yang, Peng Zhang BMC Genomics 2012, 13:64 (10 February 2012)

Research article   Open Access

Transcriptional responses of Burkholderia cenocepacia to polymyxin B in isogenic strains with diverse polymyxin B resistance phenotypes

Slade A Loutet, Flaviana Di Lorenzo, Chelsea Clarke, Antonio Molinaro, Miguel A Valvano BMC Genomics 2011, 12:472 (29 September 2011)

Methodology article   Open Access

Nonparametric methods for the analysis of single-color pathogen microarrays

Omar J Jabado, Sean Conlan, Phenix-Lan Quan, Jeffrey Hui, Gustavo Palacios, Mady Hornig, Thomas Briese, W Ian Lipkin BMC Bioinformatics 2010, 11:354 (28 June 2010)

Technical Note   Open Access

A general framework for optimization of probes for gene expression microarray and its application to the fungus Podospora anserina

Frédérique Bidard, Sandrine Imbeaud, Nancie Reymond, Olivier Lespinet, Philippe Silar, Corinne Clavé, Hervé Delacroix, Véronique Berteaux-Lecellier, Robert Debuchy BMC Research Notes 2010, 3:171 (18 June 2010)

This article is part of a collection on Microarray normalization...

Research article   Open Access

Transcriptional response of Burkholderia cenocepacia J2315 sessile cells to treatments with high doses of hydrogen peroxide and sodium hypochlorite

Elke Peeters, Andrea Sass, Eshwar Mahenthiralingam, Hans Nelis, Tom Coenye BMC Genomics 2010, 11:90 (5 February 2010)

Research article   Open Access

Reciprocal regulation by the CepIR and CciIR quorum sensing systems in Burkholderia cenocepacia

Eoin P O'Grady, Duber F Viteri, Rebecca J Malott, Pamela A Sokol BMC Genomics 2009, 10:441 (17 September 2009)

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Gene expression changes linked to antimicrobial resistance, oxidative stress, iron depletion and retained motility are observed when Burkholderia cenocepacia grows in cystic fibrosis sputum

Pavel Drevinek, Matthew TG Holden, Zhaoping Ge, Andrew M Jones, Ian Ketchell, Ryan T Gill, Eshwar Mahenthiralingam BMC Infectious Diseases 2008, 8:121 (19 September 2008)

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Characterization of a newly developed chicken 44K Agilent microarray

Xianyao Li, Hsin-I Chiang, James Zhu, Scot E Dowd, Huaijun Zhou BMC Genomics 2008, 9:60 (31 January 2008)