Table 2

Area under the curves (AUCs) for five simulation models *
Model
 Multiple Testing
 Quality Measures




Math
 Math
 Math
 Math
 Math
 Math
 Math
Model 1 δg = 2.5
 Unadjusted
 0.777
 0.380
 0.925
 0.892
 0.871
 0.743
 0.924

WBH
 0.812
 0.382
 0.929
 0.895
 0.885
 0.772
 0.932
Model 2 δg = 2.0
 Unadjusted
 0.840
 0.387
 0.934
 0.907
 0.898
 0.809
 0.932

WBH
 0.878
 0.387
 0.937
 0.912
 0.911
 0.846
 0.937
Model 3 δg = 1.5
 Unadjusted
 0.895
 0.394
 0.933
 0.918
 0.922
 0.868
 0.932

WBH
 0.925
 0.395
 0.937
 0.923
 0.932
 0.902
 0.936
Model 4 δg = 1.0
 Unadjusted
 0.918
 0.399
 0.921
 0.913
 0.926
 0.889
 0.915

WBH
 0.935
 0.401
 0.917
 0.918
 0.934
 0.912
 0.891
Model 5 δg = 0.5
 Unadjusted
 0.876
 0.408
 0.875
 0.876
 0.884
 0.850
 0.850

WBH
 0.882
 0.410
 0.858
 0.861
 0.882
 0.860
 0.770

For Math and Math, the sensitivity parameter ν was set to 0.05.

* Simulated probe level data was summarized using RMA

Hu et al. BMC Genomics 2006 7:33   doi:10.1186/1471-2164-7-33