Table 2

Ultra-CNMSs in Arabidopsis-Brassica orthologs and Arabidopsis paralogs

CNMSs
Orthologs
Orthologs
Function description





Arabidopsis
Brassica
Arabidopsis
Brassica


(GA)n
At2g16780
BOMMT72TR
At4g35050

WD-40 repeat protein
(GA)n
At4g25620
gn1ltil104045340
At5g52430

hydroxyproline-rich glycoprotein protein
(GAA)n
Atlg12420
BONGX39TF
At4g22780

ACT domain protein
(GAA)n
At4g29000
BOHVH87TR
At2g20110

TSO1-like CXC domain protein
(CT)n
Atlg07870
BONGE63TR
At2g28590
BONRT22TR
protein kinase
(CT)n
Atlg14870
BONHS20TF
At5g35525

unknown
(CT)n
Atlg68360
BOIHI85TR
Atlg67030

zinc finger
(CT)n
Atlg77660
BOOAX17TF
Atlg21920

phosphatidylinositol-4-phos phate 5-kinase-related
(CT)n
At2g28890
BOHQE28TR
Atlg07630

protein phosphatase 2C
(CT)n
At2g45050
BONAX55TR
At3g60530

zinc finger
(CT)n
At2g47440
BOHWG09TF
At3g62570

heat shock protein
(CT)n
At3g06760
BOICE92TR
At5g49230

drought-responsive protein
(CT)n
At2g47485
BOIFI37TR
At3g62650

unknown
(CT)n
At3g22270
BOGAX66TF
At4g14990

unknown
(CT)n
At4g34720
BOHJQ57TF
At2g16510

vacuolar ATP synthase
(CT)n
At5g01240
BOHGK06TF
At2g38120

amino acid permease
(CT)n
At5g11930
BOHPT64TF
At4g33040

glutaredoxin protein
(CTT)n
At5g27430
gn1ltil103985703
At3g05230

signal peptidase subunit

Zhang et al. BMC Genomics 2006 7:323   doi:10.1186/1471-2164-7-323