Figure 4.

Benchmark test of updated versions of EFICAz. Precision (A-C), recall (D-F) and number of enzyme types described by four-field EC numbers (G-I) for different versions of EFICAz, at different levels of maximal testing to training sequence identity, averaged per enzyme type. Curves in red correspond to enzyme types for which at least 10 training sequences were available; curves in blue correspond to all enzyme types. The training of versions 2.0, 3.0 and 4.0 of EFICAz is based on the Releases 2.0, 3.0 and 4.0 of UniProt, respectively. The new Swiss-Prot sequences added to UniProt 5.0 since the release of UniProt 2.0, 3.0 and 4.0 constitute the test sequences for versions 2.0, 3.0 and 4.0 of EFICAz. See Methods for a full description of the benchmark procedure.