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List of genes and gene-specific primers for RT-PCR |
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| UniGene ID (GenBank ID) |
Gene descriptiona |
PCR primers |
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| Forward |
Reverse |
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| Mm.99495 (AK033813) |
9230112N15Rik, hypothetical protein |
GTCCGGTGCTAATAGAGCCGGCTAG |
GGCTGATGAGGTCAACTGGAACTAG |
| Mm.190454 (AK079000) |
9230107O10Rik, hypothetical protein (Defb20) |
GGTTATGGGCAGTGAGTGGCACAC |
GGACAACGGCCTTCGTGAACAAG |
| Mm.99123 (AK020307) |
9230102M18Rik, hypothetical lipocalin protein (Lcn12) |
CCACCACCAGCCATGCAGTTTCAG |
GAGGCTCTACTGGCAGGAACCTGTTC |
| Mm.297297 (NM_203508) |
LOC219026, hypothetical protein (Gene model 75) |
AGCGACGGGTGCACTGATTAGATG |
CAGAACCATCCAGAGGTGATGAGAC |
| Mm.99530 (AK020304) |
9230102D03Rik, hypothetical protein (Defb41) |
TCTTGTCCAAGAAACTGTACCATGAAG |
CAGTAAGTAGTACTTCTGTGTGGCAG |
| Mm.99350 (AK033758) |
9230104O11Rik, hypothetical protein |
CATGAAAGGCTTCAGAAGAGAG |
CAGAATAATAGGAATTAACACACC |
| Mm.235619 (AK020345) |
9230113P08Rik, unknown EST |
GCCGCAATGGCATGAAATCATGCTG |
ACATAGAGAGGAGTATGGGGCCTG |
| Mm.99733 (AK020348) |
9230116B18Rik, similar to ACBP |
GAGTCACAGCATTCCGTGTCTCATC |
GGAGATCTGATTTCTCCGTCACC |
| Mm.297745 (NM_001033421) |
LOC330921, hypothetical protein (Gene model 846) |
GGTTGCAGGATGTTTGTGCTGGTG |
CAGAACTAGAGTCCCATTGGGAGG |
| Mm.335028 (XM_356144) |
LOC382065, hypothetical protein (Gene model 1110) |
GGCCGGTGGCTTCAATACTCTTACCACG |
AACTTGCACGGCAATGATGGGGCCGC |
| Mm.229362 (AK033834) |
9230117D22Rik, hypothetical protein |
CACTGATCTCCAAGGCCGTGA |
AGAGCTCTGCCGTCAACACCAGC |
| Mm.159846 (AK020329) |
9230110F15Rik, hypothetical protein |
ATCCCAGACTGAGATGGGCAAGC |
ACTGGGACACAGTGCCATTGCTG |
| Mm.99387 (BY721060) |
LOC432867, hypothetical protein (Defb42) |
CCTTCCACCATGAGACTGTATCTGC |
CCATTGCTTTAGCCGGCCGTGTGAG |
| Mm.99065 (AK078980) |
9230002F21Rik, similar to 2D6 Gylcoprotein (Defb22) |
GTTCCTGGCCCATTTGGTCACAG |
GCACCAACCATTGCAGCAGTGCTGGC |
| Mm.82875 (AK078987) |
2410125J01Rik, unknown EST (Defb30) |
GTCTTGCTCTCCTATGTTCCAC |
GTAGAGAACACTAGCCGGGATC |
| Mm.319913 (BY721150) |
9230112K08Rik, unknown EST (CRISP4) |
GAGTTGGAGTTCAGCTGCTGCAGAG |
CACAGCCAACGAGGTAGGTAGAGGC |
| Mm.332572 (NM_001033459) |
LOC381667, hypothetical protein (Gene model 1679) |
GTCTGCTGCTGCCTTAAAGCAG |
GTCCTGATGCAACAGTTGCTGTGGC |
| Mm.291102 (NM_001033418) |
LOC330470, hypothetical protein (Gene model 767) |
CAACCTGACAGCAGGAACATGGC |
GGGAAAGGCACATGGAGCATAGTCTG |
| Mm.261496 (XM_001002680) |
9230106F14Rik, hypothetical protein |
CACCCGCATGACTGGTGACATCAAC |
CACAGCCCCAGCTTTGGAATAGG |
| Mm.252404 (NM_177813) |
C630025C03, hypothetical protein |
CAGATGTCTCATCTTTCCCTTC |
ATCAGATAATGAAAGTCCAGGGC |
| Mm.234248 (BB625488) |
LOC629747, similar to Eppin |
ACCATGCAGCTCCAGGCCTACTTC |
GGCTTGACAAGTCAGGTGTTGGTG |
| Mm.159975 (AK020314) |
9230104L09Rik, hypothetical protein (Cystatin E2) |
ATGTCCAGGGAGCTCAGGCATGG |
GAGCCTGGGCTGCTGATGCTG |
| Mm.245908b (AK079042) |
9230118I06Rik, hypothetical protein (Defb44) |
GACCCTCCACAGCTATGAACC |
CTGGAGCTGTGAGGCTAGGTC |
| Mm.117440 (XM_484760) |
LOC433181, hypothetical protein |
GTTGCAGAGTCTGCTGTTGC |
GCCACCAGTTGAGAACATTCC |
| Mm.99782 (AK020352) |
9230117E20Rik, hypothetical serine protease inhibitor |
GCATGTTCAACGCCCCTAAC |
GTTTGGCAGAATGCACAGCGG |
| Mm.190482 (AK020324) |
9230107M04Rik, unclassifiable |
CATCCTCCAGAACAAGTTG |
GTTAGGAGAACATTGCTTCC |
| Mm.99576 (AK033776) |
9230106D23Rik, hypothetical protease protein (Ovch2) |
GTTTGTGAGGCCTGTGTGTC |
CACTCCAGCCAGAGTCCAGG |
| Mm.99499 (AK033743) |
9230101D24Rik, hypothetical lipocalin protein (Lcn6) |
ATCTTTCCTAGGCCAGGCGG |
TTCTGCAGCTGAGCCTGCTG |
| Mm.293365 (NM_001033240) |
LOC209351, similar to WAP four-disulfide core 6-like 1 |
GAGCATCCAGGAACCTGAGC |
CAGACAACGGTGCAGATACC |
| Mm.190489 (BY720992) |
9230010P13Rik, unknown EST |
AGACTACAAACCACAGCAGC |
CAGTAAGTCCAGCAGCACG |
| Mm.99690b (AK079019) |
9230111O07Rik, unclassifiable |
TCATGAAGCCCTCGTGGTTC |
CCAGCGGGAAGTCAGGGTC |
| Mm.99400 (NM_001034871) |
LOC328788, hypothetical protein (Gene model 749) |
CACAGCGACAGGGACTTATC |
GCCAGATCGACAGGGACAC |
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a Genes annotated or named during the updates of the library are shown in parentheses. b UniGene ID numbers of Mm.245908 and Mm.99690 have been changed into Mm.387101 and Mm.389336, respectively, during the update of the UniGene database. | |||
Oh et al. BMC Genomics 2006 7:314 doi:10.1186/1471-2164-7-314 |
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