BMC Genomics

official impact factor 4.21

Open Access

Compositional discordance between prokaryotic plasmids and host chromosomes

Mark WJ van Passel, Aldert Bart, Angela CM Luyf, Antoine HC van Kampen and Arie van der Ende*

BMC Genomics 2006, 7:26 doi:10.1186/1471-2164-7-26

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BioMed Central: 8 citations

Research article   Open Access

Relative entropy differences in bacterial chromosomes, plasmids, phages and genomic islands

Jon Bohlin, Mark WJ van Passel, Lars Snipen, Anja B Kristoffersen, David Ussery, Simon P Hardy BMC Genomics 2012, 13:66 (10 February 2012)

Research article   Open Access Highly Accessed

A quantitative account of genomic island acquisitions in prokaryotes

Tom E Roos, Mark WJ van Passel BMC Genomics 2011, 12:427 (24 August 2011)

Research article   Open Access

The mosaicism of plasmids revealed by atypical genes detection and analysis

Emanuele Bosi, Renato Fani, Marco Fondi BMC Genomics 2011, 12:403 (8 August 2011)

Research article   Open Access

Quantitative analysis of replication-related mutation and selection pressures in bacterial chromosomes and plasmids using generalised GC skew index

Kazuharu Arakawa, Haruo Suzuki, Masaru Tomita BMC Genomics 2009, 10:640 (30 December 2009)

Research   Open Access

A hidden reservoir of integrative elements is the major source of recently acquired foreign genes and ORFans in archaeal and bacterial genomes

Diego Cortez, Patrick Forterre, Simonetta Gribaldo Genome Biology 2009, 10:R65 (16 June 2009)

A large-scale survey of potential recently acquired integrative elements in 119 archaeal and bacterial genomes reveals that many recently acquired genes have originated from integrative elements

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Analysis of plasmid genes by phylogenetic profiling and visualization of homology relationships using Blast2Network

Matteo Brilli, Alessio Mengoni, Marco Fondi, Marco Bazzicalupo, Pietro Liò, Renato Fani BMC Bioinformatics 2008, 9:551 (21 December 2008)

Research article   Open Access

Reliability and applications of statistical methods based on oligonucleotide frequencies in bacterial and archaeal genomes

Jon Bohlin, Eystein Skjerve, David W Ussery BMC Genomics 2008, 9:104 (28 February 2008)

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The reach of the genome signature in prokaryotes

Mark WJ van Passel, Eiko E Kuramae, Angela CM Luyf, Aldert Bart, Teun Boekhout BMC Evolutionary Biology 2006, 6:84 (13 October 2006)