Table 1

Summary of the top 10 discrepant probesets whose (DRG,SN) expression ratios from the TwoRA deviate most from the OneRA.

ProbeSet ID (Gene Symbol)
Log 2 intensity



DRG
SN
SA



1R
2R
1R
2R
1R
2R

1425983_x_at (Hipk2)
0.87
0.89
8.20
0.73
7.79
0.70
1422277_at (Glra1)
2.35
2.40
9.65
2.46
9.87
2.46
1422009_at (Atp1b2)
2.98
2.56
12.73
5.50
12.57
4.49
1450177_at (Ngfr)
8.98
2.63
2.25
2.33
2.23
2.27
1425337_at (Slc12a5)
2.34
2.33
9.89
3.50
9.63
3.54
1425963_at (Cabp7)
1.94
1.98
7.88
2.07
7.80
2.03
1439083_at (Ahi1)
2.14
2.17
7.77
2.05
7.96
2.54
1429566_a_at (Hipk2)
1.62
1.55
11.01
5.60
10.78
5.71
1456637_at (Lrrtm2)
8.57
3.35
3.92
4.00
4.59
4.07
1423669_at (Col1a1)
11.06
5.86
2.76
2.81
2.74
2.74

Listed are gene annotations (probeset ID and gene symbol) and log2 intensities from all biological versus protocol groups.

Diboun et al. BMC Genomics 2006 7:252   doi:10.1186/1471-2164-7-252