|
Transferability assessment of HapMap SNPs |
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| Population |
SNPs Transferability Performance with r2 ≥ 0.80 |
|||
|
|
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| Number of SNPs |
Mean-r2 |
Min-r2 |
Coverage |
|
|
|
||||
| European |
843 |
0.984 |
0.459 |
96.4% |
| Asian |
693 |
0.982 |
0.410 |
97.1% |
| African |
406 |
0.982 |
0.510 |
94.8% |
|
HapMap data are used as the reference panel and the corresponding population in NIEHS is assessed. HapMap CEU panel for NIEHS European assessment; HapMap CHB panel for NIEHS Asian assessment and HapMap YRI panel for NIEHS African assessment. | ||||
Tantoso et al. BMC Genomics 2006 7:238 doi:10.1186/1471-2164-7-238 |
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