Table 4 |
|||
|
Comparison between the JoinMap/perl consensus map and three alternative synthetic maps built with PhenoMap. |
|||
|
Base map |
|||
|
|
|||
|
Steptoe/Morex |
Yerong/Franklin |
Selected by PhenoMapa |
|
|
|
|||
|
Correlation between locus positions in synthetic maps and locus positions in the consensus mapb |
|||
|
|
|||
|
Mean ± SD |
0.996 ± 0.004 |
0.992 ± 0.014 |
0.995 ± 0.006 |
|
Range |
0.988–0.998 |
0.959–0.998 |
0.982–0.998 |
|
|
|||
|
Chromosome lengths in synthetic maps as a percentage of the lengths in the consensus mapb |
|||
|
|
|||
|
Mean ± SD |
98.7 ± 9.4% |
103.9 ± 8.4% |
96.5 ± 6.2% |
|
Range |
79.1–108.8% |
95.2–119.2% |
86.0–103.2% |
|
|
|||
|
a The base (reference) maps selected by PhenoMap were: Clipper/Sahara (1H), Yerong/Franklin (2H), Clipper/Sahara (3H), Dayton/Zhepi2 (4H), Barque-73/CPI71284-48 (5H, 6H) and Dayton/Zhepi2 (7H). b The values reported are averages across chromosomes. Eighty-five loci not assayed in the seven populations used to construct the synthetic maps (Table 3) were removed from the JoinMap/perl consensus map before the comparison. |
|||
|
Wenzl et al. BMC Genomics 2006 7:206 doi:10.1186/1471-2164-7-206 |
|||
