Table 6

Genomic datasets used in this study.

Species

Taxa

Data origin

Aspergillus nidulans

Ascomycete

Broad Institute. Data as of 07/03/2003 [69].

Ashbya gossypii

Ascomycete

Ashbya genome database. Data as of release 2.1 [70].

Arabidopsis thaliana

Plant

The TIGR Arabidopsis thaliana database. Data as release 5.0 [71].

Caenorhabditis elegans

Animal

The worm database. Data as of v.150 [72].

Candida albicans

Ascomycete

The Candida genome database. Data as of 16/7/2005 [73].

Cryptococcus neoformans

Basidiomycete

Stanford University. Data as of v.040623 [74].

Drosophila melanogaster

Animal

Flybase. Data as of release 4.2.1 [75].

Fusarium graminearum

Ascomycete

Broad Institute. Data as of 11/03/2003 [76].

Magnaporthe grisea

Ascomycete

Broad Institute. Data as of 31/10/2003 [77].

Neurospora crassa

Ascomycete

Broad Institute. Data as of release 7 [78].

Oryza sativa

Plant

The TIGR rice genome annotation. Data as of release 3.0 [79].

Saccharomyces cerevisiae

Ascomycete

Saccharomyces genome database. Data as of 27/8/2004 [80].

Schizosaccharomyces pombe

Ascomycete

The Sanger Institute. Data as of 18/8/2005 [81].

Trichoderma reesei

Ascomycete

The Joint Genome Institute. Data as v1.2 predicted proteins [82].

Ustilago maydis

Basidiomycete

Broad Institute. Data as of 01/04/2004 [83].

Vizcaíno et al. BMC Genomics 2006 7:193   doi:10.1186/1471-2164-7-193