Generation, annotation and analysis of ESTs from Trichoderma harzianum CECT 2413

doi:10.1186/1471-2164-7-193

BMC Genomics

Volume 7

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Vizcaíno JA
González FJ
Suárez MB
Redondo J
Heinrich J
Delgado-Jarana J
Hermosa R
Gutiérrez S
Monte E
Llobell A
Rey M

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Vizcaíno JA
González FJ
Suárez MB
Redondo J
Heinrich J
Delgado-Jarana J
Hermosa R
Gutiérrez S
Monte E
Llobell A
Rey M
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Research article

Generation, annotation and analysis of ESTs from Trichoderma harzianum CECT 2413

Juan Antonio Vizcaíno¹ , Francisco Javier González² , M Belén Suárez¹^,3 , José Redondo² , Julian Heinrich² , Jesús Delgado-Jarana¹ , Rosa Hermosa³ , Santiago Gutiérrez⁴ , Enrique Monte² , Antonio Llobell¹ and Manuel Rey²

¹IBVF-CIC Isla de la Cartuja, CSIC/Universidad de Sevilla. Avda. Américo Vespucio s/n. 41092, Sevilla, Spain

²Newbiotechnic, S. A. (NBT). Parque Industrial de Bollullos A-49 (PIBO). 41110, Bollullos de la Mitación. Sevilla, Spain

³Spanish-Portuguese Center of Agricultural Research (CIALE), Departamento de Microbiología y Genética, Universidad de Salamanca, Edificio Departamental, lab 208, Plaza Doctores de la Reina s/n, 37007, Salamanca, Spain

⁴Area of Microbiology. Escuela Superior y Técnica de Ingeniería Agraria. Universidad de León, Campus de Ponferrada. Avda. Astorga s/n. 24400, Ponferrada, Spain

author email corresponding author email

BMC Genomics 2006, 7:193doi:10.1186/1471-2164-7-193


Published:	27 July 2006

Additional files

Additional file 1:

Table of T. harzianum CECT 2413 unique sequences. It includes their name, accession number, BLAST annotation of the top hit, E-value and protein domains found in InterProScan analysis. The unique sequences that have putative signal peptides are highlighted in yellow.

Format: XLS Size: 962KB Download file

This file can be viewed with: Microsoft Excel Viewer

Additional file 2:

Table of multisequence contigs and the ESTs that cluster in each of them.

Format: XLS Size: 760KB Download file

This file can be viewed with: Microsoft Excel Viewer

Additional file 3:

Table of T. harzianum CECT 2413 unique sequences that are (i) common to fungi, plants and animals, (ii) fungal unique, (iii) common with fungi and animals but not present in plants and (iv) common with plants and fungi but not present in animals. It includes their name, accession number, BLAST annotation of the top hit, E-value and protein domains found in InterProScan analysis.

Format: XLS Size: 892KB Download file

This file can be viewed with: Microsoft Excel Viewer