Table 5

List of candidates for various deafness loci.

Loci
Location
Candidates
Loci
Location
Candidates

DFNA7
1q21–q23
ATP1B1
DFNB5
14q12
**


F5
DFNB13
7q34–36
SLC37A3


MYOC
DFNB17
7q31
WNT2


SLC19A2
DFNB19
18p11
LAMA1


POU2F1
DFNB20
11q25–qter
KCNJ1
DFNA16
2q24
*


TECTA
DFNA18
3q22
**


SLC37A2
DFNA21
6p21
*
DFNB27
2q23–q31
ITGA6
DFNA23
14q21–q22
**


SP3
DFNA25
12q21–24
HAL
DFNB28
22q13
KCNJ4


SLC25A3


MT


IGF1


SOX10
DFNA27
4q12
HAT
DFNB32
1p13.3–22.1
COL11A1


KDR/VEGFR2


DR1
DFNA30
15q25–26
**


F3
DFNA31
6p21.3
TNF
DFNB33
9q34.3
TUBB2


POU5F1


SLC34A3
DFNA34
1q44
**
DFNB35
14q24.1–24.3
NUMB
DFNA42
5q31.1
FGF1


FOS


GFRA3
DFNB38
6q26–q27
QK1


IK
DFNB39
7q11.22–q21.12
POR


PCDH1
DFNB40
22q
CRYBB2


DIAPH1


SLC25A1


POU4F3


TBX1
DFNA47
9p21–22
**




*The chromosomal regions for DFNA16 and DFNA21 code for 7 and 9 genes, respectively. However, none of these genes were listed in the mouse or human inner ear databases. The candidates as described in the text are based on their functional significance.

**The chromosomal regions for DFNA18, DFNA23, DFNA30, DFNA34, DFNA47 and DFNB5 code for a substantial number of genes. A small fraction of these genes are listed in human and mouse inner ear databases as shown in Table 6. Furthermore, no hits were scored by the protein interaction approach. Therefore the genes scoring hits in the ear databases may be considered as candidates and prioritized based on their function. Some of these priority candidates are described in the text.

Alsaber et al. BMC Genomics 2006 7:180   doi:10.1186/1471-2164-7-180