Table 2

Primers pairs and PCR conditions used for the amplification of grapevine flavonoid hydroxylase genes.

Code
Sense primer
Anti-sense primer
Expected size (bp)
Annealing temp. (°C)

F3'H
F3'H_S
F3'H_AS
825*
60
F3'5'H
F3'5'H_S
F3'5'H_AS
1020*
56
F3
VvF3'H_S
VvF3'H_AS
196
58
F3-1
VvF3'H-indel_S
VvF3'H_AS
166
58
F35-1
Vv3'5'H-1A_S
VvF3'5'H-1A_AS
156
58
F35-2
Vv3'5'H-2A_S
Vv3'5'H-2A_AS
152
65
F3int
VvF3'H-intron_S
VvF3'H-intron_AS
255
58
F35-1int
Vv3'5'H-1A-intron_S
Vv3'5'H-intron_AS
589
58
F35-2int
Vv3'5'H-2A-intron_S
Vv3'5'H-intron_AS
593
58
38C24-FM
38C24-FM_S
38C24-FM_AS
312
58
38C24-RM
38C24-RM_S
38C24-RM_AS
330
58
17K14-FM
17K4-FM_S
17K4-FM_AS
327
58
9C17-FM
9C17-FM_S
9C17-FM_AS
358
58
40A22-FM
40A22-FM_S
40A22-FM_AS
327
58
5A23-FM
5A23-FM_S
5A23-FM_AS
218
54

* in absence of introns.

Castellarin et al. BMC Genomics 2006 7:12   doi:10.1186/1471-2164-7-12