Table 3 |
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|
The common set of DNA-binding transcriptional regulators in corynebacteria |
|||||
|
Functional category |
CDS in C. glutamicum ATCC 13032 |
Orthologous CDS in |
|||
|
|
|||||
|
No. |
Gene name or regulator family |
C. efficiens YS-314 |
C. diphtheriae NCTC 13129 |
C. jeikeium K411 |
|
|
|
|||||
|
Cell division & septation |
cg0878 |
whiB1 |
ce0783 |
dip0712 |
jk1618 |
|
cg0850 |
whiB2 |
ce0758 |
dip0684 |
jk1644 |
|
|
cg0337 |
whiB4 |
ce0283 |
dip0299 |
jk1976 |
|
|
|
|||||
|
SOS & stress response |
cg2109 |
oxyR |
ce1817 |
dip1421 |
jk1102 |
|
cg2114 |
lexA |
ce1823 |
dip1426 |
jk1106 |
|
|
cg2152 |
clgR |
ce1855 |
dip1456 |
jk1122 |
|
|
cg2516 |
hrcA |
ce2190 |
dip1721 |
jk0600 |
|
|
cg3097 |
hspR |
ce2626 |
dip2117 |
jk0184 |
|
|
cg1765 |
ArsR family |
ce1687 |
dip1296 |
jk0985 |
|
|
|
|||||
|
Macroelement & metal |
cg2103 |
dtxR |
ce1812 |
dip1414 |
jk1097 |
|
homeostasis |
cg2502 |
furB |
ce2180 |
dip1710 |
jk0612 |
|
cg3253 |
mcbR |
ce2788 |
dip2274 |
jk0101 |
|
|
cg1631 |
MerR family |
ce1574 |
dip1205 |
jk0904 |
|
|
cg1633 |
MerR family |
ce1576 |
dip1207 |
jk0906 |
|
|
|
|||||
|
Carbohydrate metabolism |
cg0350 |
glxR |
ce0287 |
dip0303 |
jk1972 |
|
cg0444 |
ramB |
ce0385 |
dip0369 |
jk1934 |
|
|
cg1738 |
acnR |
ce1663 |
dip1284 |
jk0970 |
|
|
cg2115 |
DeoR family |
ce1824 |
dip1427 |
jk1107 |
|
|
cg1486 |
IclR family |
ce1426 |
dip1126 |
jk1222 |
|
|
cg2910 |
LacI family |
ce2511 |
dip1969 |
jk0329 |
|
|
|
|||||
|
Biosynthesis pathways |
cg1585 |
argR |
ce1531 |
dip1172 |
jk0846 |
|
cg2112 |
YbaD family |
ce1820 |
dip1424 |
jk1105 |
|
|
|
|||||
|
Unknown |
cg3261 |
GntR family |
ce2809 |
dip2280 |
jk0088 |
|
cg2831 |
LuxR family |
ce2445 |
dip1889 |
jk0397 |
|
|
cg3001 |
MarR family |
ce2556 |
dip2008 |
jk0271 |
|
|
cg3315 |
MarR family |
ce2826 |
dip2296 |
jk2061 |
|
|
cg0454 |
TetR family |
ce0397 |
dip0937 |
jk1455 |
|
|
cg1053 |
TetR family |
ce0985 |
dip0888 |
jk1501 |
|
|
|
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|
Brune et al. BMC Genomics 2005 6:86 doi:10.1186/1471-2164-6-86 |
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