Table 7

C. elegans candidate orphans (1,358 out of 21,437) matching Ancylostoma clusters

C. elegans genea

Descriptor

Ancylostoma cluster idb

ESTs per cluster

E-value

C. elegans gene length (aa)

Matched region length (%)

%ID


F31E8.1

Hypothetical protein

AC05087.cl

1

1e – 07

249

14.5

45

F57B10.14

Hypothetical protein

AE02023.cl

2

3e – 20

56

75.0

69

R10E9.3

Contains Cytochrome C heme-binding site

AC02329.cl

1

2e – 10

149

79.2

32

AE00556.cl

2

5e – 19

149

97.3

31

T07A9.13

Putative nuclear encoded protein

AE02236.cl

1

4e – 31

111

91.9

49

Y35H6.1

Hypothetical protein

AE03902.cl

1

6e – 23

161

47.2

48

Y41C4A.3

Hypothetical protein

AE00269.cl

14

1e – 05

162

49.4

37

Y54G2A.27

Hypothetical protein

AC04390.cl

1

2e – 05

229

14.4

38

AE01938.cl

9

8e – 07

229

11.4

48

ZC487.3

Hypothetical protein

AC04655.cl

1

2e – 08

79

81.0

38

ZK686.1

Nuclear transition protein

AC00867.cl

16

2e – 07

44

68.2

62

AE01651.cl

3

3e – 07

44

68.2

62

ZK84.5

Hypothetical protein

AC00410.cl

3

6e – 11

84

70.2

46


a Of 21,437 proteins 1,358 were candidate orphans

b AC, Ancylostoma caninum; AE, A. ceylanicum

Mitreva et al. BMC Genomics 2005 6:58   doi:10.1186/1471-2164-6-58

Open Data