Table 5

The most abundantly represented transcripts in the A. caninum cDNA libraries

non-redundant GenBank


A. caninum cluster id

ESTs per cluster

    ESTs from library

Accession

C. elegans gene

iL3

taL3

ssL3

Best identity descriptor

SW / TRa

E-value

Wormpep97b


AC00932.cl

203

186

0

17

Ancylostoma duodenale cytochrome oxidase subunit I

CAD10437

2e – 304

C06G4.2b

AC00471.cl

120

2

0

118

C. elegans CMP-sialic acid transporter

O02345

2e – 83

ZK896.9b

AC00048.cl

114

100

11

3

C. elegans hsp-12.6 alpha-B-crystallin

Q20165

6e – 40

F38E11.2b

AC01032.cl

104

104

0

0

Ancylostoma duodenale cytochrome oxidase subunit II

AAL50814

1e – 09

-

AC01031.cl

93

90

0

3

Ancylostoma duodenale cytochrome oxidase subunit III

CAD10435

2e – 143

-

AC00807.cl

69

4

2

63

Necator americanus ancylostoma secreted protein 1 precursor

AAD13340

3e – 28

F33A8.2

AC00205.cl

65

51

1

13

Ancylostoma duodenale COX2, cytochrome c oxidase subunit II

NP_579953

4e – 125

F26E4.12

AC00967.cl

54

9

0

45

Ancylostoma ceylanicum cathepsin D-like aspartic protease

AAO22152

8e – 174

R12H7.2

AC00134.cl

44

44

0

0

C. elegans putative protein, nematode specific

NP_497272

9e – 53

K02F3.9b

AC01029.cl

39

37

2

0

C. elegans stress associated endoplasmic reticulum protein

NP_510604

9e – 37

F59F4.2b

AC00137.cl

38

37

0

1

C. elegans RNA recognition motif

CAB03222

4e – 35

R06C1.4b

AC00023.cl

38

36

0

2

C. elegans rpl-2 Ribosomal Proteins L2

Q9XVF7

3e – 148

B0250.1b

AC00060.cl

36

36

0

0

Ancylostoma caninum secreted protein ASP-2 precursor

AAC35986

2e – 134

F11C7.3b

AC01400.cl

32

1

0

31

C. elegans ham-2 zinc finger protein

NP_508781

1e – 20

C07A12.1b

AC00976.cl

32

29

0

3

Tetrahymena pigmentosa metallothionein MT-2

AAL87687

6e – 12

K11G9.6

AC00193.cl

31

7

0

24

Pisum sativum putative senescence-associated protein

BAB33421

2e – 61

F58H1.7

AC00931.cl

29

6

0

23

novel

-

-

-

AC00079.cl

28

25

2

1

Ostertagia ostertagi unknown protein

AAC08432

8e – 06

-

AC00980.cl

27

11

0

16

C. elegans Glycerol kinase

AAA79749

8e – 70

R11F4.1b

AC00971.cl

26

9

0

17

C. elegans rpl-1 Ribosomal Protein Large subunit

NP_491061

5e – 116

Y71F9AL.13ab

AC01023.cl

25

22

2

1

Ostertagia ostertagi putative ES protein F7

CAD20464

9e – 87

F02A9.2

AC00913.cl

25

6

17

2

C. elegans ribosomal protein L37

O62388

2e – 50

W01D2.1b

AC02930.cl

24

0

0

24

C. elegans calponin-like protein

NP_504712

4e – 119

T25F10.6b

AC00252.cl

24

12

12

0

C. elegans rpl-43

CAB54440

4e – 49

Y48B6A.2b

AC01020.cl

23

20

3

0

C. elegans rps-15 Ribosomal Protein Small subunit RPS-15

NP_492384

1e – 88

F36A2.6b


a SW/TR is Swiss-prot and TrEMBL Proteinknowledgebase http://us.expasy.org/sprot/ webcite.

b C. elegans homolog has higher probability match than the best GenBank descriptor.

Mitreva et al. BMC Genomics 2005 6:58   doi:10.1186/1471-2164-6-58

Open Data