BMC Genomics

official impact factor 4.21

Open Access

Secondary structure in the target as a confounding factor in synthetic oligomer microarray design

Vladyslava G Ratushna, Jennifer W Weller and Cynthia J Gibas*

BMC Genomics 2005, 6:31 doi:10.1186/1471-2164-6-31

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BioMed Central: 5 citations

Research article   Open Access

Detection of tmRNA molecules on microarrays at low temperatures using helper oligonucleotides

Lauris Kaplinski, Ott Scheler, Sven Parkel, Priit Palta, Kadri Toome, Ants Kurg, Maido Remm BMC Biotechnology 2010, 10:34 (28 April 2010)

Software   Open Access

Dynamic probe selection for studying microbial transcriptome with high-density genomic tiling microarrays

Hedda Høvik, Tsute Chen BMC Bioinformatics 2010, 11:82 (9 February 2010)

Research article   Open Access

Hybridization thermodynamics of NimbleGen Microarrays

Ulrike Mueckstein, Germán G Leparc, Alexandra Posekany, Ivo Hofacker, David P Kreil BMC Bioinformatics 2010, 11:35 (19 January 2010)

Methodology article   Open Access

A white-box approach to microarray probe response characterization: the BaFL pipeline

Kevin J Thompson, Hrishikesh Deshmukh, Jeffrey L Solka, Jennifer W Weller BMC Bioinformatics 2009, 10:449 (29 December 2009)

Method   Open Access

Optimization and clinical validation of a pathogen detection microarray

Christopher W Wong, Charlie Heng, Leong Wan Yee, Shirlena WL Soh, Cissy B Kartasasmita, Eric AF Simoes, Martin L Hibberd, Wing-Kin Sung, Lance D Miller Genome Biology 2007, 8:R93 (28 May 2007)

New design and optimization of pathogen detection microarrays is shown to allow robust and accurate detection of a range of pathogens. The customized microarray platform includes a method for reducing PCR bias during DNA amplification.