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Comparative promoter region analysis powered by CORG

Christoph Dieterich*, Steffen Grossmann, Andrea Tanzer, Stefan Röpcke, Peter F Arndt, Peter F Stadler and Martin Vingron

BMC Genomics 2005, 6:24 doi:10.1186/1471-2164-6-24

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DoOPSearch: a web-based tool for finding and analysing common conserved motifs in the promoter regions of different chordate and plant genes

Endre Sebestyén, Tibor Nagy, Sándor Suhai, Endre Barta BMC Bioinformatics 2009, 10(Suppl 6):S6 (16 June 2009)

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TFCONES: A database of vertebrate transcription factor-encoding genes and their associated conserved noncoding elements

Alison P Lee, Yuchen Yang, Sydney Brenner, Byrappa Venkatesh BMC Genomics 2007, 8:441 (29 November 2007)

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Unraveling transcriptional control and cis-regulatory codes using the software suite GeneACT

Tom Cheung, Yin Kwan, Micah Hamady, Xuedong Liu Genome Biology 2006, 7:R97 (25 October 2006)

Abstract | Full text | PDF | PubMed |  Editor’s summary

GENEACT, a new software suite for the detection of evolutionarily conserved transcription factor binding sites or microRNAs from differentially expressed genes from DNA microarray data, is described.

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