Table 1

Selected GO terms significantly enriched toward high 2 kb upstream alignment scores. P-values are Bonferroni-corrected. b,m,c represents GO hierarchy (b:biological process, m:molecular function, and c:cellular component). mean: mean alignment score. The mean alignment score for all the genes analyzed is 411.01.
GO accession
 GO term definition
 p-value
 mean
 # genes
GO:0007275
 b
 development
 2.69E-48
 860.98
 1432
GO:0009653
 b
 morphogenesis
 2.82E-47
 898.06
 949
GO:0009887
 b
 organogenesis
 1.50E-42
 911.47
 765
GO:0048513
 b
 organ development
 1.50E-42
 911.47
 765
GO:0007154
 b
 cell communication
 8.30E-38
 799.48
 2473
GO:0007165
 b
 signal transduction
 4.61E-24
 791.28
 1969
GO:0007399
 b
 neurogenesis
 7.04E-22
 945.20
 322
GO:0003700
 m
 transcription factor activity
 1.63E-20
 892.63
 673
GO:0050877
 b
 neurophysiological process
 4.29E-09
 836.34
 435
GO:0019226
 b
 transmission of nerve impulse
 7.07E-06
 888.41
 197
GO:0007268
 b
 synaptic transmission
 1.07E-05
 889.12
 192
GO:0016055
 b
 Wnt receptor signaling pathway
 4.19E-04
 989.45
 78

Lee et al. BMC Genomics 2005 6:168   doi:10.1186/1471-2164-6-168